Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHF65622.1 | AHF65623.1 | PCH70_04690 | PCH70_04700 | pepSY-associated TM helix. | Protein FiuA. | 0.789 |
AHF65622.1 | AHF65624.1 | PCH70_04690 | PCH70_04710 | pepSY-associated TM helix. | Transmembrane sensor. | 0.604 |
AHF65622.1 | AHF65625.1 | PCH70_04690 | PCH70_04720 | pepSY-associated TM helix. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.540 |
AHF65623.1 | AHF65622.1 | PCH70_04700 | PCH70_04690 | Protein FiuA. | pepSY-associated TM helix. | 0.789 |
AHF65623.1 | AHF65624.1 | PCH70_04700 | PCH70_04710 | Protein FiuA. | Transmembrane sensor. | 0.841 |
AHF65623.1 | AHF65625.1 | PCH70_04700 | PCH70_04720 | Protein FiuA. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.746 |
AHF65623.1 | AHF66117.1 | PCH70_04700 | PCH70_09640 | Protein FiuA. | Regulatory protein. | 0.679 |
AHF65623.1 | AHF66120.1 | PCH70_04700 | PCH70_09670 | Protein FiuA. | Regulatory protein, putative. | 0.666 |
AHF65623.1 | AHF66206.1 | PCH70_04700 | PCH70_10530 | Protein FiuA. | FecR protein. | 0.702 |
AHF65623.1 | AHF66322.1 | PCH70_04700 | PCH70_11690 | Protein FiuA. | Hypothetical protein. | 0.702 |
AHF65623.1 | AHF67685.1 | PCH70_04700 | PCH70_25320 | Protein FiuA. | Amino acid adenylation. | 0.725 |
AHF65623.1 | AHF67894.1 | PCH70_04700 | PCH70_27410 | Protein FiuA. | Hypothetical protein. | 0.688 |
AHF65623.1 | AHF70215.1 | PCH70_04700 | PCH70_50620 | Protein FiuA. | Fe2+-dicitrate sensor, membrane component. | 0.695 |
AHF65624.1 | AHF65622.1 | PCH70_04710 | PCH70_04690 | Transmembrane sensor. | pepSY-associated TM helix. | 0.604 |
AHF65624.1 | AHF65623.1 | PCH70_04710 | PCH70_04700 | Transmembrane sensor. | Protein FiuA. | 0.841 |
AHF65624.1 | AHF65625.1 | PCH70_04710 | PCH70_04720 | Transmembrane sensor. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.960 |
AHF65625.1 | AHF65622.1 | PCH70_04720 | PCH70_04690 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | pepSY-associated TM helix. | 0.540 |
AHF65625.1 | AHF65623.1 | PCH70_04720 | PCH70_04700 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Protein FiuA. | 0.746 |
AHF65625.1 | AHF65624.1 | PCH70_04720 | PCH70_04710 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Transmembrane sensor. | 0.960 |
AHF65625.1 | AHF66117.1 | PCH70_04720 | PCH70_09640 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Regulatory protein. | 0.830 |
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