STRINGSTRING
AHF65623.1 AHF65623.1 AHF65624.1 AHF65624.1 AHF65622.1 AHF65622.1 AHF65625.1 AHF65625.1 AHF67685.1 AHF67685.1 AHF66206.1 AHF66206.1 AHF66322.1 AHF66322.1 AHF70215.1 AHF70215.1 AHF67894.1 AHF67894.1 AHF66117.1 AHF66117.1 AHF66120.1 AHF66120.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF65623.1Protein FiuA. (805 aa)    
Predicted Functional Partners:
AHF65624.1
Transmembrane sensor.
 
   0.841
AHF65622.1
pepSY-associated TM helix.
 
  
 0.789
AHF65625.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.746
AHF67685.1
Amino acid adenylation.
  
  
 0.725
AHF66206.1
FecR protein.
 
   0.702
AHF66322.1
Hypothetical protein.
 
 
 0.702
AHF70215.1
Fe2+-dicitrate sensor, membrane component.
 
 
 0.695
AHF67894.1
Hypothetical protein.
 
   0.688
AHF66117.1
Regulatory protein.
 
 
 0.679
AHF66120.1
Regulatory protein, putative.
 
 
 0.666
Your Current Organism:
Pseudomonas cichorii
NCBI taxonomy Id: 1441629
Other names: P. cichorii JBC1, Pseudomonas cichorii JBC1
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